PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN15301.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 270aa    MW: 30773.8 Da    PI: 6.2625
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN15301.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.58.8e-07163210455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + n +Er RR +iN+++  L+ ++P +   + k +  a +L + ++Y +sLq
  KHN15301.1 163 SRNLAERVRRGKINEKLRYLQNIVPGC---Y-KTMGMAVMLDEIINYAQSLQ 210
                 5799*********************98...2.34666666666666666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.96E-14157225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.34E-7157214No hitNo description
PROSITE profilePS5088813.719159209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-13162217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.4E-6165215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MAEFTENLQR IGPSSFPFLD IDPSMELLNQ FIGMNQLYVL DNSNLMPYFS FDTFLLGPQE  60
PEFPGNLEED FPFLFNHVNH NNALPISLPI FQAENEIHEG KKRKSMDLPE TSSVNSTPKV  120
SESGNKFKHS SGRGKRVKNN VTEEEKAKEV VNVRARSGQA TDSRNLAERV RRGKINEKLR  180
YLQNIVPGCY KTMGMAVMLD EIINYAQSLQ HQVEFLSLKL TAPSTFYGFN SEIDALETMQ  240
RARASEAKEL GMYKREGYGG VSFFQQTWHL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312560.0KT031256.1 Glycine max clone HN_CCL_43 bHLH transcription factor (Glyma07g10311.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014622382.10.0PREDICTED: transcription factor BEE 1-like
SwissprotQ8GZ133e-55BEE1_ARATH; Transcription factor BEE 1
TrEMBLA0A0B2Q1520.0A0A0B2Q152_GLYSO; Transcription factor BEE 1
STRINGGLYMA07G10311.11e-158(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33603467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.12e-56BR enhanced expression 1
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]